Beacon designer version3/24/2023 61 iĤ Beacon Designer 5.10 Evaluate Primers.63 Evaluate Primers.63 Multiplex Results.64 Design Beacons.65 Parameters for Beacon Design.65 Beacon. 4 Menus and Toolbar.4 Main Window.14 Primer Search Parameters for Standard Real Time PCR.17 Primer Search Parameters for NASBA (R) Assay.19 Beacon Search Parameters.21 TaqMan (R) Probe Search Parameters.22 Multiplex Search Parameters for Taqman Assay.24 LNA (TM) Substituted TaqMan (R) Probe Search Parameters.27 Multiplex Search Parameters for LNA (TM) substituted Taqman (R) Assay.29 FRET Probes Search Parameters.32 SYBR (R) Green Primer Search Parameters.34 BLAST Search Parameters.36 Template Structures Search.41 View Cross Homology.42 View Secondary Structures.43 Multiplex Results.44 TUTORIAL Create and Manage a Project.45 Create a New Project.45 Open Project.45 Close Project.46 Save Project As.46 Save Sequence As.46 Open Sequence.47 Open Sequence from Entrez.47 Open Sequence from dbsnp.47 Open Sequence from File.47 Add Text Sequence.48 Load Multiple SNP.49 Load Unpublished SNP information.49 Search Sequence.51 Avoid Cross Homology.52 Set Parameters for BLAST Search.52 Interpreting Human BLAST Results.55 Interpreting Microbial BLAST Results.56 Interpreting Cross Homology Results.57 Avoid Template Structures.58 Beacon Design.59 Parameters for Primer Design.59 Primer. For more information on Beacon Designer and product updates, visit the PREMIER Biosoft web site at iiģ Beacon Designer 5.10 INTRODUCTION. Use, examination, reproduction, copying, decompilation, transfer, and/or disclosure to others are strictly prohibited except by express written agreement with Premier. This program and documentation are confidential and the property of Premier. Claim of copyright does not imply waiver of Premier's other rights. PREMIER Biosoft International ("Premier") claims copyright to this program and documentation as an unpublished work. The software may be used only in accordance with the terms of the agreement. ![]() ![]() The software described in this manual is provided by PREMIER Biosoft International under a License Agreement. Information in this manual may change without notice and does not represent a commitment on the part of PREMIER Biosoft International. 1 Beacon Designer 5.10 Manual PREMIER Biosoft International 3786 Corina Way, Palo Alto, CA Tel: FAX:Ģ Copyright 2006 by PREMIER Biosoft International.
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